DOCX《Cu》

Cu Supplemental Table 2.

Differentially accumulated transcripts from CC-4532 grown in TAP with (plus Cu) or without (minus Cu) copper. FPKM values resulted from realigning reads from Castruita, Madeli, et al. Systems biology approach in Chlamydomonas reveals connections between copper nutrition and multiple metabolic steps. The Plant Cell 23.4 (2011): 1273-1292. FPKM ,,

,,

, Fold change ,,

CRR1 targets with lower transcript abundance in the absence of Cu ,,

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, 4532,,

CRR1 , crr1 ,,

,,

CRR1 targets with higher transcript abundance in the absence of Cu ,,

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, gene , symbol , location , minus Cu , plus Cu , minus Cu , minus Cu ,,

4532 minus/plus , CRR1/crr1 higher transcript abundance in the presence of Cu Cre01.g045200 , chromosome_1:6335452-6338184 ,6.2051999999999996,30.4345,1.8971199999999999,16.468699999999998,0.20388703609390657,0.11519549205462484 Cre12.g510050 , CTH1 , chromosome_12:2024725-2027967 ,55.886099999999999,265.91899999999998,68.379199999999997,373.709,0.21016211703563867,0.18297445338485291 Cre12.g537000 , chromosome_12:6256569-6259730 ,53.582099999999997,111.613,22.9191,96.121600000000001,0.48007042190425842,0.2384386027698249 Cre12.g495450 , chromosome_12:757511-760514 ,14.435499999999999,33.908900000000003,4.8088300000000004,7.5775699999999997,0.42571419302896873,0.63461373501003626 Cre04.g223050 , CAH2 , chromosome_4:2656607-2661032 ,10.141,32.420999999999999,21.1708,29.4984,0.31279109219333151,0.7176931630190112 Cre03.g184250 , chromosome_3:5352666-5355715 ,4.4263000000000003,10.348699999999999,42.422699999999999,57.607199999999999,0.42771555847594389,0.73641315668874718 Cre06.g297900 , chromosome_6:7211614-7214970 ,3.2339799999999999,13.797000000000001,0.469779,0.50975999999999999,0.23439733275349711,0.92156897363465162 Cre10.g422850 , chromosome_10:753060-759940 ,4.5717400000000001,12.66,1.9609300000000001,2.1249400000000001,0.3611169036334913,0.9228166442346607 Cre16.g662600 , chromosome_16:2729466-2732309 ,14.023199999999999,30.2315,43.919800000000002,38.209899999999998,0.46386054281130606,1.1494350940463074 Cre07.g327317 , chromosome_7:2235241-2239413 ,7.0221600000000004,20.040400000000002,2.5528200000000001,2.0351599999999999,0.35040019161294184,1.2543583796851354 Cre10.g463350 , HRP3 , chromosome_10:6068143-6071251 ,17.489699999999999,35.922600000000003,127.843,57.770499999999998,0.48687177431477668,2.2129460537817747 Cre17.g733900 , chromosome_17:4816326-4818172 ,8.6527799999999999,19.0107,9,2,0.45515315059413908,4.5 Cre09.g398400 , TRP5 , chromosome_9:1436048-1446304 ,6.06569,12.6616,39.654299999999999,1.3620699999999999,0.47906188791305998,29.113261432966002 Cre09.g405100 , chromosome_9:351202-353930 ,13.445600000000001,27.14,128.762,3.7188500000000002,0.4954163596168018,34.624144560818529 Cre09.g404750 , SRR2 , chromosome_9:406340-412599 ,5.9033199999999999,13.166700000000001,23.7986,0.66714300000000004,0.44835228265244897,35.672412061582001 higher transcript abundance in the absence of Cu Cre07.g346900 , chromosome_7:4987084-4990515 ,980.02200000000005,24.520399999999999,1929.22,10.7857,39.9676187990408,178.86831638187601 Cre08.g372200 , chromosome_8:2529267-2530757 ,1173.78,17.684899999999999,1840.74,88.920400000000001,66.371876572669336,20.700986500285648 Cre17.g700950 , FDX5 , chromosome_17:704736-706717 ,2735.51,13.9841,1732.8,0.78232199999999996,195.6157350133366,2214.9447414236083 Cre01.g029700 , chromosome_1:4388402-4390175 ,967.63400000000001,3.4045399999999999,1570.56,29.635200000000001,284.21871970956431,52.996436669906053 Cre16.g651050 , CYC6 , chromosome_16:1238557-1240109 ,1920.23,0,1279.6500000000001,0, inf. , inf. Cre07.g346950 , chromosome_7:4996499-5000945 ,331.10899999999998,19.691500000000001,935.23599999999999,1.91876,16.814818576543175,487.41687339740247 Cre07.g336800 , chromosome_7:3611515-3613640 ,48.384900000000002,11.1921,837.16200000000003,254.50800000000001,4.3231297075615842,3.2893347163939839 Cre07.g346050 , CRD1 , chromosome_7:4866865-4871395 ,1480.96,120.831,827.14300000000003,63.341700000000003,12.256457366073276,13.058427544571742 Cre02.g085450 , CPX1 , chromosome_2:1646978-1650920 ,2408.92,142.72900000000001,776.06700000000001,129.34800000000001,16.877579188532113,5.9998376472771122 Cre03.g199800 , HYDA1 , chromosome_3:8216107-8220752 ,188.732,45.7746,582.62800000000004,144.244,4.1230726210605884,4.0391836055572501 Cre12.g490500 , CGL78 , chromosome_12:1110734-1112794 ,925.97,126.319,541.87199999999996,69.717699999999994,7.3304095187580653,7.7723734431858764 Cre17.g701700 , chromosome_17:781799-786028 ,765.79899999999998,179.60900000000001,528.03700000000003,121.601,4.2637005940682258,4.3423738291625895 Cre05.g236039 , chromosome_5:2551493-2555425 ,552.43200000000002,3.5013200000000002,461.97899999999998,19.006799999999998,157.77820936104098,24.305985226340049 Cre07.g346850 , chromosome_7:4980659-4983645 ,362.27199999999999,4.9953700000000003,404.327,4.2933300000000001,72.521554959892853,94.175616595975612 Cre10.g443050 , chromosome_10:3253452-3256956 ,187.61500000000001,27.6249,302.69299999999998,39.013500000000001,6.7915177973494929,7.7586732797621334 Cre03.g146447 , chromosome_3:823537-827213 ,35.308900000000001,7.7884900000000004,240.518,48.0182,4.5334718283004793,5.0088924616083066 Cre16.g657200 , chromosome_16:2053507-2057940 ,260.99900000000002,4.7588900000000001,225.005,7.15083,54.844512060585558,31.465578121700556 Cre10.g434650 , CTR3 , chromosome_10:2302472-2307474 ,172.327,14.802300000000001,216.239,6.97281,11.641907000939042,31.011744189214966 Cre09.g397250 , chromosome_9:1623841-1629056 ,293.50099999999998,119.854,209.078,96.255300000000005,2.4488210656298492,2.1721193534278114 Cre03.g183850 , FDX6 , chromosome_3:5317758-5320038 ,142.23099999999999,59.126300000000001,203.92599999999999,74.477099999999993,2.405545417183216,2.7381033901695959 Cre16.g657250 , GOX17 , chromosome_16:2058819-2063195 ,61.907499999999999,3.9372199999999999,146.548,6.3662999999999998,15.723657809317235,23.01933619213672 Cre02.g084450 , chromosome_2:1526630-1530141 ,74.654600000000002,2.3850699999999998,137.19200000000001,12.070399999999999,31.300800395795516,11.36598621420997 Cre11.g467527 , chromosome_11:40145-45687 ,112.797,32.915900000000001,119.373,31.7622,3.4268241184351633,3.7583353797910726 Cre12.g507800 , chromosome_12:2289632-2292864 ,154.37899999999999,32.977899999999998,107.066,6.6430699999999998,4.6812865585740751,16.116945930119659 Cre10.g434350 , CTR2 , chromosome_10:2263854-2268812 ,152.732,7.5003599999999997,94.887,0.46883999999999998,20.363289228783685,202.38674174558486 Cre02.g084400 , chromosome_2:1523090-1526578 ,91.03........