PDF《TSS (in bold)》

Table S1.

Four categories of genes separated by the epigenetic marks at their TSS (in bold) H3K4me3lo H3K27me3lo 0610010O12Rik 1110014N23Rik 1110017D15Rik 1110054O05Rik 1500015O10Rik 1600029D21Rik 1700001J03Rik 1700001K19Rik 1700001K23Rik 1700001P01Rik 1700003F12Rik 1700007I08Rik 1700007K09Rik 1700011E24Rik 1700012L04Rik 1700016C15Rik 1700016D06Rik 1700018L24Rik 1700019D03Rik 1700019L03Rik 1700019O17Rik 1700020A23Rik 1700020C07Rik 1700022I11Rik 1700026J04Rik 1700027A23Rik 1700028K03Rik 1700029H14Rik 1700029I15Rik 1700029J11Rik 1700029P11Rik 1700034I23Rik 1700061G19Rik 1700061J05Rik 1700067P10Rik 1700094D03Rik 1700102P08Rik 1700109H08Rik 1700122O11Rik 1700123I01Rik 1700125H20Rik 1810012P15Rik 2010002M12Rik 2010107G12Rik 2010109I03Rik 2010111I01Rik 2210009G21Rik 2210010C04Rik 2210010C17Rik 2310003F16Rik 2310007L24Rik 2310014L17Rik 2310035K24Rik 2310042D19Rik 2310046K01Rik 2410076I21Rik 2510049J12Rik 2610028H24Rik 3200002M19Rik 3230401D17Rik 3830403N18Rik 4921501E09Rik 4921515J06Rik 4921523A10Rik 4930402F06Rik 4930404N11Rik 4930407I10Rik 4930417G10Rik 4930486L24Rik 4930503B20Rik 4930511I11Rik 4930511M11Rik 4930526D03Rik 4930538K18Rik 4930539E08Rik 4930544O15Rik 4930548H24Rik 4930550L24Rik 4930562C15Rik 4930562F07Rik 4930578C19Rik 4930579C15Rik 4930590J08Rik 4931417G12Rik 4931440F15Rik 4932412H11Rik 4932425I24Rik 4933402D24Rik 4933407L21Rik 4933408B17Rik 4933413G19Rik 4933422H20Rik 4933425L06Rik 4933425O20Rik 4933430H15Rik 4933437F05Rik 5430411K18Rik 5430427O19Rik 5430435G22Rik 5830411N06Rik 6030422M02Rik 6430531B16Rik 8430423G03Rik 9030617O03Rik 9130017N09Rik A130010J15Rik A3galt2 A430105I19Rik A630001G21Rik A830080D01Rik A930005I04Rik AA986860 Aanat Abca9 Abcc9 Abcg2 Abcg8 Abra Acacb Acad11 Acat3 Accn3 Acer3 Acnat1 Acot10 Acot11 Acox2 Acpt Acrbp Acsbg2 Acsm3 Acta2 Actc1 Actg2 Actr1b Acy3 Adam1a Adam1b Adam21 Adam30 Adam4 Adam6b Adam8 Adamts13 Adamts16 Adamts20 Adamtsl2 Adcy10 Adcy4 Adcy7 Adig Adipor2 Adora3 Adprhl1 AF251705 Afp Ager Agmat Agt Agxt2l1 AI182371 AI428936 Aif1 Aifm3 Aim1 Aim1l Aim2 Aipl1 Ak1 Ak7 Akap14 Akap2 Akap3 Akap8l Akr1b8 Akr1c13 Alas2 Aldh1l1 Aldh3b1 Aldh8a1 Aldob Aldoc Alox5ap Alpk3 Amd1 Amd2 Amhr2 Amica1 Amigo3 Ampd1 Amt Amy1 Amz1 Angel2 Angpt4 Angptl1 Angptl3 Angptl7 Ankdd1b Ankmy1 Ankrd22 Ankrd23 Ankrd61 Ankrd7 Anks1b Anxa9 Aoc2 Aoc3 Aox3l1 Ap1m2 Aplnr Apoa1 Apobec2 Apoc1 Apol10b Apol6 Apol7b Apol8 Apom Apon Aqp1 Aqp4 Aqp7 Aqr Arap3 Arg1 Arhgap32 Arhgap40 Arhgef10l Arhgef15 Arhgef18 Arhgef4 Arhgef5 Arhgef9 Arl11 Arl13a Arl13b Arl9 Arrdc5 Asap1 Asb14 Asb2 Asb4 Asgr1 Ash1l Ash2l Aspa Aspn Atp11c Atp1b4 Atp2a1 Atp4a Atp4b Atp6v1b1 Atp6v1c2 Atp8a2 Atp8b4 Avil Avpr2 AW112010 Awat2 Axl AY358078 B3galt2 B3galt5 B3gnt6 B430306N03Rik Baat Baiap2l2 Baiap3 Bank1 BC017612 BC018242 BC018507 BC021614 BC021785 BC026585 BC032203 BC048507 BC048562 BC051019 BC051070 Bcas1 Bckdhb Bcl2l14 Bcl2l15 Bcl9l Bco2 Bdh1 Bdkrb1 Bdp1 Best1 Bfsp2 Bglap-rs1 Bhlha15 Blk Blnk Bloc1s2 Bnipl Brd3 Brdt Bri3 Brs3 Bst1 Btbd16 Btla Btnl2 C030019I05Rik C030030A07Rik C130050O18Rik C1qb C1qtnf1 C1qtnf3 C1qtnf5 C1qtnf6 C1qtnf9 C1ra C3 C330021F23Rik C3ar1 C4b C77080 Cabp4 Cacna1a Cacna1c Cacna1d Cacng1 Calml3 Calml4 Calr4 Camk1 Camk1g Camk2a Camp Capg Capn11 Capn12 Capn3 Capn9 Car5b Card14 Card6 Card9 Casc3 Cask Casp1 Casq1 Cass4 Catsper3 Catsperg1 Cbx7 Cc2d2a Ccdc11 Ccdc135 Ccdc144b Ccdc154 Ccdc162 Ccdc27 Ccdc63 Ccdc73 Ccdc76 Ccdc89 Ccl17 Ccl22 Ccl4 Ccl5 Ccl6 Ccnb1ip1 Ccr2 Ccr5 Ccr8 Ccrl1 Cct8l1 Cd101 Cd160 Cd163 Cd163l1 Cd177 Cd19 Cd200 Cd200r4 Cd209a Cd209d Cd209e Cd226 Cd244 Cd276 Cd28 Cd300lf Cd300lg Cd53 Cd59a Cd5l Cd68 Cd7 Cd72 Cd74 Cd79a Cd80 Cd93 Cdca7l Cdcp2 Cdh10 Cdh15 Cdh23 Cdh5 Cdhr2 Cdk15 Cdyl Ceacam1 Ceacam16 Ceacam2 Ceacam20 Cela1 Celf2 Cetn1 Cfb Cfd Cfi Cfp Chd8 Chgb Chml Chmp4b Chrm4 Chrna10 Chrna2 Chrne Chst3 Chst4 Cib3 Ciita Cilp Ckm Clcn1 Cldn15 Cldn19 Clec10a Clec12a Clec1b Clec2e Clec2g Clec3b Clec4a1 Clec4a2 Clec4f Clic3 Clip3 Cln8 Clstn3 Clta Cluap1 Cmbl Cmya5 Cnga1 Cnksr1 Cnot7 Cntnap2 Coil Col10a1 Col17a1 Col1a2 Col20a1 Col28a1 Col3a1 Col4a6 Col6a6 Col9a3 Colec11 Colq Cort Cox4i2 Cox6a2 Cox7a1 Cp Cpa3 Cpsf4l Cpt1b Cpt1c Cr2 Crb1 Creb3l3 Creb3l4 Crim1 Crtam Cryba1 Crybg3 Crygn Csad Csdc2 Csf2rb Csf3 Csf3r Csl Csmd1 Csn2 Csrp1 Cst6 Cst7 Csta Ctf1 Ctla2a Ctla4 Ctnnb1 Ctrl Ctsk Ctss Ctsw Cubn Cul4b Cuzd1 Cx3cr1 Cxcl10 Cxcr3 Cxcr5 Cxcr6 Cyb561 Cybb Cym Cyp11a1 Cyp26c1 Cyp2ab1 Cyp2d26 Cyp2j6 Cyp2t4 Cyp4f14 Cyp4f15 Cyp4f16 Cyp4f18 Cysltr1 Cyth4 Cytip D130043K22Rik D17H6S56E-3 D1Pas1 D630037F22Rik D630039A03Rik D630045J12Rik Dab2 Dab2ip Dbh Dcaf12l1 Dcaf4 Dcun1d1 Dcun1d4 Ddc Dennd2c Dennd4a Dgcr6 Dgkd Dhx32 Dixdc1 Dkk4 Dlg2 Dmbt1 Dnahc17 Dnahc9 Dnaja3 Dnajb13 Dnajb7 Dnajc13 Dnajc25 Dnalc4 Dnase1 Dnase1l2 Dnd1 Dnmbp Dock9 Dok3 Dpep1 Dpep2 Dpm3 Dpy19l1 Drp2 Dsg1a Dupd1 Dus2l Dusp10 Dusp18 Dusp27 Dynll2 Dyrk4 E030002O03Rik E230025N22Rik Ecm1 Ecm2 Ednra Efcab4b Efcab5 Egfl7 Egfl8 Ehbp1 Eif2c4 Eif4ebp3 Eif4g1 Elane Elavl3 Elf5 Elmo3 Emr1 Emr4 Enthd1 Epb4.2 Epgn Epha1 Ephx1 Ephx3 Eps15l1 Eps8 Eps8l1 Eps8l2 Ermap Ern2 Erp27 Espnl Ethe1 Ets1 Evi2a Evi2b Evi5 Extl1 Extl3 F2 F2rl2 F5 Fabp4 Fabp6 Fam107b Fam111a Fam115c Fam129c Fam132a Fam135a Fam160a1 Fam166a Fam166b Fam171a1 Fam178b Fam183b Fam193a Fam196b Fam198a Fam23a Fam24a Fam26d Fam38a Fam55d Fam65b Fam65c Fam71b Fam71f2 Fancc Fap Far2 Fblim1 Fbrs Fbxl2 Fbxl5 Fbxo40 Fcer1g Fcer2a Fcgbp Fcgr2b Fcgr3 Fcgrt Fcrla Fcrlb Fer1l4 Ffar2 Fgd2 Fgd3 Fgf1 Fgf22 Fgf23 Fgf7 Filip1 Filip1l Flrt1 Flywch1 Fmn1 Fndc1 Folr4 Foxi1 Foxk2 Foxn3 Foxp3 Fpgs Frmd7 Frrs1 Fscn2 Fscn3 Fsd2 Fsip1 Fxyd2 Fxyd4 G6pd2 Gabrr2 Gadl1 Gal3st4 Gapdhs Gata1 Gatad2b Gatsl3 Gbp11 Gcc1 Gcnt2 Gcnt7 Gdpd2 Gdpd3 Gfap Ggt6 Ghrh Ghrl Gigyf1 Gimap3 Gimap4 Gimap5 Gimap7 Gja10 Gja6 Gk2 Glce Glipr1 Glra4 Glt8d2 Gltscr1 Gna15 Gnb3 Gne Gng2 Gng7 Gnmt Gnrh1 Gnrhr Golga7b Gp1ba Gp9 Gpam Gpat2 Gpbar1 Gpcpd1 Gpd1 Gpha2 Gphb5 Gpld1 Gpnmb Gpr1 Gpr111 Gpr113 Gpr115 Gpr133 Gpr15 Gpr151 Gpr152 Gpr161 Gpr173 Gpr179 Gpr18 Gpr182 Gpr183 Gpr21 Gpr22 Gpr34 Gpr35 Gpr44 Gpr55 Gpr56 Gpr61 Gpr77 Gpr82 Gpr84 Gpr87 Gpr97 Gprin3 Gpx8 Gramd1c Gramd3 Grb7 Greb1l Grifin Grk1 Gsg1 Gsta3 Gsta4 Gstm7 Gtsf1l Guca1a Guca1b Gucy1b2 Gulo Gykl1 Gys2 Gzmm H1foo H2-Aa H2-DMb1 H2-DMb2 H2-Eb1 H2-M10.2 H2-M2 H2-Ob H2-T3 Haao Hal Hamp Havcr2 Hba-a1 Hba-a2 Hbb-b1 Hbb-b2 Hc Hdac4 Hdac9 Hdc Hemgn Hepacam Hgfac Hiat1 Hif1a Hif3a Higd1b Higd1c Hipk4 Hist1h2aa Hist1h2ba Hk1 Hk3 Hnf1a Hnf4a Homez Hormad2 Hoxa5 Hpgd Hpgds Hsd17b14 Hsd3b7 Hsf5 Hsp90aa1 Hspa12b Htr2b Hus1b Hvcn1 Hyal1 I830077J02Rik Ibtk Icos Ide Iffo2 Ifi27l2a Ifi30 Ifi47 Ifit1 Ifit3 Ifitm2 Ifitm3 Ifitm5 Ifnz Igfals Igj Igll1 Igsf6 Igsf8 Igsf9 Iigp1 Il13 Il16 Il17c Il18bp Il18r1 Il1a Il1r1 Il20rb Il23a Il2ra Il2rb Il34 Il5ra Il7r Il9r Impg1 Impg2 Inhbc Inpp4b Inpp5j Insig2 Insl5 Ip6k2 Ipcef1 Iqsec1 Irf6 Irgc1 Islr Itga10 Itga2b Itga6 Itgad Itgae Itgam Itgax Itgb1bp2 Itgb1bp3 Itgb7 Itih4 Iyd Jph2 Kcna10 Kcnab1 Kcnd1 Kcnip1 Kcnip3 Kcnip4 Kcnj13 Kcnj14 Kcnj16 Kcnk7 Kcnma1 Kcnmb1 Kcnrg Kcnu1 Kctd14 Kctd18 Kctd4 Kdm4c Kel Khdc1a Kif7 Klb Klf12 Klhl30 Klhl38 Klk10 Klk14 Klk9 Klrb1c Klrb1f Klrc1 Klre1 Klrg1 Klrk1 Kmo Kncn Krt222 Krt28 Krt4 Ktn1 Kynu L1cam Lair1 Lalba Lama4 Lamb2 Lamb3 Lamp3 Lass3 Lat2 Lats1 Lbp Lcat Lcn4 Lct Ldha Ldhc Ldhd Ldlrad1 Ldlrad2 Leap2 Lefty1 Lenep Lgals3 Lgals4 Lgals7 Lgals8 Lgi4 Lhfpl1 Lhfpl5 Lifr Lilrb3 Lim2 Lime1 Liph Lipm Lman1 Lman1l Lmod1 Lmod2 Lpar5 Lpcat2b Lpin3 Lrfn1 Lrrc10 Lrrc14b Lrrc19 Lrrc25 Lrrc39 Lrrc66 Lrrn3 Lrrn4cl Lrrtm2 Lsr Lta Ltf Ly6a Ly6c1 Ly6c2 Ly6g5b Ly6i Ly86 Lypd2 Lyz2 Lzts1 Magix Maml2 Mamstr Map3k13 Mapk10 Mas1 Masp2 Matn1 Mc1r Mc5r Mcoln3 Mcpt8 Mcts2 Mdga1 Mecom Mef2c Mest Mfi2 Mfrp Mfsd2b Mgp Mgst1 Mia2 Mical3 Micall2 Mid1 Mip Mmd Mmp12 Mmp13 Mmp19 Mmp21 Morc1 Morc2b Morn3 Mosc1 Moxd2 Mpeg1 Mpp4 Mpv17 Mrc1 Mrps24 Mrvi1 Ms4a15 Ms4a4b Ms4a4d Ms4a6c Ms4a6d Ms4a7 Msh4 Mslnl Msmp Msra Mst1r Mthfs Mtmr7 Mttp Muc13 Muc5b Muc6 Mustn1 Mx2 Myadm Mybpc3 Mybphl Myh3 Myh4 Myh7b Myl10 Myl6 Myl9 Mylk4 Myo15 Myo1a Myo1f Myo1h Myo3b Myoc Myocd Myom1 Myoz1 Myoz3 Naa11 Naalad2 Naaladl1 Naip2 Naip7 Nanos3 Nap1l5 Nbas Ncf1 Ncf2 Ncf4 Nckap5 Ndel1 Ndst2 Necab1 Nedd8 Neurl3 Nfam1 Nfia Nfyc Ng23 Ngp Nhedc1 Nhej1 Nhsl1 Nkg7 Nlgn3 Nlrc4 Nlrc5 Nlrp1a Nlrp1b Nmnat3 Nmur1 Nod2 Nos3 Nostrin Notch2 Notch4 Nox1 Npb Npc1l1 Npff Npm2 Nppa Nqo1 Nr1i2 Nradd Nrap Nrip2 Nrn1l Nsmce4a Nt5dc2 Nudt15 Nup210l Nxf2 Nxnl1 Nynrin Nyx Oas1a Oas1e Oas2 Oas3 Oasl2 Oaz3 Odz4 Ogn Ola1 Olfml3 Omd Omg Omp Opalin Oplah Opn1sw Oprl1 Orm1 Orm2 Orm3 Osbpl10 Osgin1 Osta Otor Otos Otud6a Ovgp1 P2rx1 P2rx7 P2ry12 P2ry13 P2ry14 Pabpc1l Pabpc2 Pabpc4 Pabpn1l Padi1 Padi3 Padi4 Padi6 Palld Palm3 Panx3 Papola Paqr5 Park2 Parp11 Pate4 Patl2 Pcbd1 Pcdha10 Pcdhb16 Pcdhb5 Pcdhga11 Pcdhga12 Pcdhga2 Pcdhga3 Pcdhga8 Pcdhga9 Pcdhgc3 Pcdhgc4 Pcdhgc5 Pcolce Pcp2 Pcsk1 Pcyt1b Pdcd1lg2 Pde1a Pde1c Pde2a Pde4c Pde4d Pde6a Pde6b Pde6g Pdha2 Pdzd3 Pdzd9 Pdzk1 Pear1 Pef1 Pgam2 Pgf Pglyrp1 Phactr1 Phex Phf17 Phf3 Phldb2 Phyhd1 Phyhipl Pi16 Pid1 Pign Pik3cd Pip5kl1 Pipox Pir Piwil2 Pkhd1l1 Pklr Pkmyt1 Pkn2 Pkp3 Pla1a Pla2g10 Pla2g3 Pla2g4c Pla2g4f Plat Plcd4 Plce1 Pld4 Pld6 Plekha6 Plekhb1 Plekhg4 Plekhn1 Plin4 Pln Plp1 Plxnb3 Pmch Pnma3 Pnmt Pnp2 Pnpla1 Pnrc1 Podn Podnl1 Pole4 Pomc Popdc2 Por Pot1b Pou1f1 Pou2af1 Ppapdc3 Pparg Ppargc1a Ppef2 Ppfia4 Ppp1r13b Ppp2r3a Pram1 Prelp Prf1 Prg4 Prkag1 Prl4a1 Prm1 Prox2 Proz Prph2 Prpsap1 Prr13 Prr14 Prr15l Prr19 Prr5l Prrt3 Prss2 Prss27 Prss33 Prss34 Prss36 Prss39 Prss52 Prss53 Prss55 Prss8 Prx Psapl1 Psat1 Psen2 Psma6 Psma8 Psors1c2 Ptgds Ptger1 Ptges Ptgir Ptgs2 Ptplad2 Ptprd Pvrl4 Pxt1 Pycr1 Pygl Pygm Pyroxd2 Qprt Qrfp Qrich2 Qtrtd1 R3hdm2 Rab25 Rab26 Rab27b Rab36 Rab3il1 Rab44 Raet1b Raet1d Ramp3 Rapgef5 Rapsn Rarb Rb1cc1 Rbbp6 Rbm25 Rbm47 Rbms2 Rbpj Rcbtb2 Rdh1 Rdh9 Rec8 Reep2 Rem2 Renbp Rfpl4 Rfx8 Rgs18 Rgs20 Rgs3 Rgs8 Rgs9 Rhbdl1 Rhd Rho Rhox2f Rin2 Ripply1 Rlbp1 Rltpr Rnase10 Rnase6 Rnf11 Rnf121 Rnf123 Rnf125 Rnf128 Rnf165 Rnf169 Rnf183 Rnf4 Rnf43 Rpgrip1 Rph3al Rpl39l Rpl3l Rpl41 Rps13 Rps6ka3 Rps6ka6 Rsad2 Rsph1 Rsph6a Rtp1 Runx2 Runx3 Ruvbl2 Rxfp1 Rxfp4 Ryr1 S100a14 S100a3 S100a4 S100a6 S100b Sag Samd3 Samd4b Samsn1 Sap25 Sardh Sarnp Sbsn Scd3 Scd4 Scel Scg3 Scgb1c1 Scgb3a1 Scn11a Scn2b Scn4a Scoc Scp2 Scx Sdcbp2 Sds Sec16b Selp Sema3b Sema4a Sema4b